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Is Your Bronchiectasis Flare-up Caused by a Bacterial Super Infection?

7/8/2025

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Many people assume it’s easy to tell the difference between a viral illness and a bacterial one.
Dr Elisa Ignatius
But as Dr. Elisa Ignatius, an Infectious Disease expert specilaizing in bronchiectasis, at Johns Hopkins, explained at the Berkeley Patient Conference — it’s not always so clear-cut.

When you catch a respiratory virus, it doesn’t just make you feel lousy. Viruses like flu, RSV, and even the common cold can actually damage the lining of your airways, impair mucociliary clearance, and disrupt the function of immune cells that normally keep bacteria in check.

This creates a vulnerable, “immunosuppressed” environment in the lungs and airways — giving bacteria that usually live harmlessly in your upper respiratory tract, like Streptococcus pneumoniae, Haemophilus influenzae, and Staphylococcus aureus, the perfect opportunity to multiply and cause secondary infection.

That’s why what starts as a routine viral illness can sometimes lead to a bacterial superinfection.

For people with conditions like bronchiectasis or COPD, this dynamic can make flare-ups more severe and harder to manage.

One clinical clue that suggests bacterial infection has taken hold? The so-called “double dip” — when symptoms improve at first, then worsen again, especially with new or higher fever, more productive cough, thicker sputum, and increased fatigue.

It’s not a perfect rule, and antibiotics aren’t always necessary, but recognizing these patterns can help patients and clinicians make smarter decisions about when to treat and when to wait.
​

Awareness of how viral and bacterial infections interact is key to staying on top of your lung health and preventing complications.
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    Author

    Linda Cooper Esposito, MPH is a health educator with bronchiectasis. She developed the BE CLEAR Method to Living with Bronchiectasis and writes with compassion  and humor about this chronic lung disease.

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